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sm-commit - [SM-Commit] GIT changes to master grimoire by Ismael Luceno (cac46d95dd5ae4dfa225b3df36e4354cce32c053)

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  • From: Ismael Luceno <scm AT sourcemage.org>
  • To: sm-commit AT lists.ibiblio.org
  • Subject: [SM-Commit] GIT changes to master grimoire by Ismael Luceno (cac46d95dd5ae4dfa225b3df36e4354cce32c053)
  • Date: Sun, 23 Oct 2022 15:06:42 +0000

GIT changes to master grimoire by Ismael Luceno <ismael AT sourcemage.org>:

ChangeLog | 1 +
science/fasda/BUILD | 4 ++++
science/fasda/DEPENDS | 2 ++
science/fasda/DETAILS | 18 ++++++++++++++++++
science/fasda/HISTORY | 2 ++
science/fasda/INSTALL | 2 ++
6 files changed, 29 insertions(+)

New commits:
commit cac46d95dd5ae4dfa225b3df36e4354cce32c053
Author: Ismael Luceno <ismael AT sourcemage.org>
Commit: Ismael Luceno <ismael AT sourcemage.org>

fasda: new spell, 100% C Differential Analysis Tool

diff --git a/ChangeLog b/ChangeLog
index 37fe1f1..db3da06 100644
--- a/ChangeLog
+++ b/ChangeLog
@@ -1,5 +1,6 @@
2022-10-23 Ismael Luceno <ismael AT sourcemage.org>
* science-libs/biolibc: new spell, High-performance, memory-efficient
bioinformatics library
+ * science/fasda: new spell, 100% C Differential Analysis Tool

2022-10-19 Treeve Jelbert <treeve AT sourcemage.org>
* qt6/FUNCTIONS: fix build for some AMD cpus
diff --git a/science/fasda/BUILD b/science/fasda/BUILD
new file mode 100755
index 0000000..6574cf3
--- /dev/null
+++ b/science/fasda/BUILD
@@ -0,0 +1,4 @@
+${MAKE:-make} -j "$MAKE_NJOBS" \
+ CC="${CC:-cc}" \
+ HOSTCC="${HOSTCC:-${CC:-cc}}" \
+ PREFIX="$INSTALL_ROOT"/usr
diff --git a/science/fasda/DEPENDS b/science/fasda/DEPENDS
new file mode 100755
index 0000000..303b326
--- /dev/null
+++ b/science/fasda/DEPENDS
@@ -0,0 +1,2 @@
+depends libxtend &&
+depends biolibc
diff --git a/science/fasda/DETAILS b/science/fasda/DETAILS
new file mode 100755
index 0000000..3bee64a
--- /dev/null
+++ b/science/fasda/DETAILS
@@ -0,0 +1,18 @@
+ SPELL=fasda
+ VERSION=0.1.0
+ SOURCE="$SPELL-$VERSION.tar.gz"
+
SOURCE_URL[0]=https://github.com/auerlab/$SPELL/archive/refs/tags/$VERSION.tar.gz
+
SOURCE_HASH=sha512:6e412ed107a2418d1b16fff6898c2ed0eb37dcf40544d53663bdd7056c7c6c1fd1454a93103cf2c888264251c8f2748074dd82990b43446fa02c97cdd9a2cb85
+SOURCE_DIRECTORY="$BUILD_DIRECTORY/$SPELL-$VERSION"
+ WEB_SITE="https://github.com/auerlab/fasda";
+ LICENSE[0]="BSD-2-Clause"
+ ENTERED=20221023
+ KEYWORDS=""
+ SHORT="100% C Differential Analysis Tool"
+cat << EOF
+FASDA aims to provide a fast and simple differential analysis tool that just
+works and does not require any knowledge beyond basic Unix command-line
+skills. It operates on a simple command-line interface (CLI) analogous
+to popular tools such as bedtools, BWA, and samtools. The code is written
+entirely in C and built on biolibc to maximize efficiency and portability.
+EOF
diff --git a/science/fasda/HISTORY b/science/fasda/HISTORY
new file mode 100644
index 0000000..20a3e5e
--- /dev/null
+++ b/science/fasda/HISTORY
@@ -0,0 +1,2 @@
+2022-10-23 Ismael Luceno <ismael AT sourcemage.org>
+ * BUILD, DEPENDS, DETAILS, INSTALL: spell created
diff --git a/science/fasda/INSTALL b/science/fasda/INSTALL
new file mode 100755
index 0000000..87c6a5e
--- /dev/null
+++ b/science/fasda/INSTALL
@@ -0,0 +1,2 @@
+${MAKE:-make} install \
+ PREFIX="$INSTALL_ROOT"/usr



  • [SM-Commit] GIT changes to master grimoire by Ismael Luceno (cac46d95dd5ae4dfa225b3df36e4354cce32c053), Ismael Luceno, 10/23/2022

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